Stem-loop mtr-MIR7696c

Accession

MI0025224

Description

Medicago truncatula mtr-MIR7696c precursor miRNA

Literature search

1 open access papers mention mtr-MIR7696c
(2 sentences)

Sequence

gcuucAAGUUCUCAUAAUUCAAAAAGauaaguuacauuugaaaaacuuccauaaacuuuucgUUUUGAAUUAUGAGAACUUGAagc
((((((((((((((((((((((((.((.(((((......(((....)))....))))).)).))))))))))))))))))))))))

Structure

                        A  u     acauuu   a 
gcuucAAGUUCUCAUAAUUCAAAA Ga aaguu      gaa a
|||||||||||||||||||||||| || |||||      |||  
cgaAGUUCAAGAGUAUUAAGUUUU cu uucaa      cuu a
                        g  u     --auac   c 

Annotation confidence Not enough data

Genome context

AC225474.24: 39293-39378 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from mtr-MIR7696c

Mature mtr-miR7696c-5p

• Accession: MIMAT0029990
• Description: Medicago truncatula mtr-miR7696c-5p mature miRNA
• Sequence: 6 - AAGUUCUCAUAAUUCAAAAAG - 26
• Evidence: experimental ; Illumina [1]

Mature mtr-miR7696c-3p

• Accession: MIMAT0029991
• Description: Medicago truncatula mtr-miR7696c-3p mature miRNA
• Sequence: 63 - UUUUGAAUUAUGAGAACUUGA - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23572382
   microRNA profiling of root tissues and root forming explant cultures in Medicago truncatula
   "Eyles RP, Williams PH, Ohms SJ, Weiller GF, Ogilvie HA, Djordjevic MA, Imin N"
   "Planta (2013) 238:91-105