Stem-loop oar-let-7d

Accession

MI0025244

Description

Ovis aries oar-let-7d precursor miRNA

Literature search

12 open access papers mention oar-let-7d
(39 sentences)

Sequence

18357 reads, 3212 reads per million, 13 experiments

ccuaggaAGAGGUAGUAGGUUGCAUAGuuuuagggcagggauuuugcccacaaggagguaacuauacgaccugcugccuuucuuagg
(((((((.((((((((((((((.((((((...((((((.....))))))..........)))))).)))))))))))))))))))))

Structure

       A              C      -------uua      g 
ccuagga GAGGUAGUAGGUUG AUAGuu          gggcag g
||||||| |||||||||||||| ||||||          |||||| a
ggauucu uuccgucguccagc uaucaa          cccguu u
       -              a      uggaggaaca      u 

Annotation confidence Low

Genome context

chr2: 27327398-27327484 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oar-let-7d

Mature oar-let-7d

• Accession: MIMAT0030023
• Description: Ovis aries oar-let-7d mature miRNA
• Sequence: 8 - AGAGGUAGUAGGUUGCAUAG - 27
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23269700
   MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
   "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
   "Physiol Genomics (2013) 45:151-161