Stem-loop oar-let-7d

Accession

MI0025244

Description

Ovis aries oar-let-7d precursor miRNA

Literature search

36 open access papers mention oar-let-7d
(90 sentences)

Sequence

1534030 reads, 2795.0 reads per million, 143 experiments

ccuaggaAGAGGUAGUAGGUUGCAUAGUUUuagggcagggauuuugcccacaaggagguaaCUAUACGACCUGCUGCCUUUCUuagg
(((((((.((((((((((((((.((((((...((((((.....))))))..........)))))).)))))))))))))))))))))

Structure

       A              C      -------Uua      g 
ccuagga GAGGUAGUAGGUUG AUAGUU          gggcag g
||||||| |||||||||||||| ||||||          |||||| a
ggauUCU UUCCGUCGUCCAGC UAUCaa          cccguu u
       -              A      uggaggaaca      u 

Annotation confidence High

Genome context

chr2: 27327398-27327484 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oar-let-7d

Mature oar-let-7d-5p

• Accession: MIMAT0030023
• Description: Ovis aries oar-let-7d-5p mature miRNA
• Sequence: 8 - AGAGGUAGUAGGUUGCAUAGUUU - 30
• Evidence: experimental ; cloned [1]

Mature oar-let-7d-3p

• Accession: MIMAT0052520
• Description: Ovis aries oar-let-7d-3p mature miRNA
• Sequence: 62 - CUAUACGACCUGCUGCCUUUCU - 83
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23269700
   MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
   "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
   "Physiol Genomics (2013) 45:151-161