Stem-loop oar-mir-106b

Accession

MI0025249

Description

Ovis aries oar-mir-106b precursor miRNA

Literature search

1 open access papers mention oar-mir-106b
(2 sentences)

Sequence

31810 reads, 6678 reads per million, 13 experiments

ccugccggggcUAAAGUGCUGACAGUGCAGAUagugguccugugugcuaccgcacuguggguacuugcugcuccagcagg
(((((.(((((..(((((((.(((((((.(.(((((........)))))).))))))).)))))))...))))).)))))

Structure

     c     -UA       G       A A     guc 
ccugc ggggc   AAGUGCU ACAGUGC G Uagug   c
||||| |||||   ||||||| ||||||| | |||||    
ggacg ccucg   uucaugg ugucacg c aucgu   u
     a     ucg       g       c -     gug 

Annotation confidence Low

Genome context

chr24: 36244122-36244201 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oar-mir-106b

Mature oar-miR-106b

• Accession: MIMAT0030028
• Description: Ovis aries oar-miR-106b mature miRNA
• Sequence: 12 - UAAAGUGCUGACAGUGCAGAU - 32
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23269700
   MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
   "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
   "Physiol Genomics (2013) 45:151-161