Stem-loop oar-mir-106b

Accession

MI0025249

Description

Ovis aries oar-mir-106b precursor miRNA

Literature search

13 open access papers mention oar-mir-106b
(18 sentences)

Sequence

670548 reads, 1648.0 reads per million, 143 experiments

ccugccggggcUAAAGUGCUGACAGUGCAGAUagugguccugugugcuaCCGCACUGUGGGUACUUGCUGcuccagcagg
(((((.(((((..(((((((.(((((((.(.(((((........)))))).))))))).)))))))...))))).)))))

Structure

     c     -UA       G       A A     guc 
ccugc ggggc   AAGUGCU ACAGUGC G Uagug   c
||||| |||||   ||||||| ||||||| | |||||    
ggacg ccucG   UUCAUGG UGUCACG C aucgu   u
     a     UCG       G       C -     gug 

Annotation confidence High

Genome context

chr24: 36244122-36244201 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oar-mir-106b

Mature oar-miR-106b-5p

• Accession: MIMAT0030028
• Description: Ovis aries oar-miR-106b-5p mature miRNA
• Sequence: 12 - UAAAGUGCUGACAGUGCAGAU - 32
• Evidence: experimental ; cloned [1]

Mature oar-miR-106b-3p

• Accession: MIMAT0052522
• Description: Ovis aries oar-miR-106b-3p mature miRNA
• Sequence: 50 - CCGCACUGUGGGUACUUGCUG - 70
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23269700
   MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
   "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
   "Physiol Genomics (2013) 45:151-161