Stem-loop oar-mir-19b

Accession

MI0025263

Description

Ovis aries oar-mir-19b precursor miRNA

Literature search

5 open access papers mention oar-mir-19b
(16 sentences)

Sequence

654387 reads, 131451 reads per million, 13 experiments

cacuguucuaugguuaguuuugcagguuugcauccagcugugugauauucugcUGUGCAAAUCCAUGCAAAACUGAcugugguagug
(((((..(((((((((((((((((((((((((..((((.............)))))))))).)).))))))))))))))))))))))

Structure

     uu                 -  -      uc    ugugu 
cacug  cuaugguuaguuuugca gg uuugca  cagc     g
|||||  ||||||||||||||||| || ||||||  ||||     a
gugau  ggugucAGUCAAAACGU CC AAACGU  GUcg     u
     --                 A  U      --    ucuua 

Annotation confidence Medium

Genome context

chr10: 66142232-66142318 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oar-mir-19b

Mature oar-miR-19b

• Accession: MIMAT0030041
• Description: Ovis aries oar-miR-19b mature miRNA
• Sequence: 54 - UGUGCAAAUCCAUGCAAAACUGA - 76
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23269700
   MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
   "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
   "Physiol Genomics (2013) 45:151-161