Stem-loop oar-mir-200a

Accession

MI0025264

Description

Ovis aries oar-mir-200a precursor miRNA

Literature search

22 open access papers mention oar-mir-200a
(59 sentences)

Sequence

1298685 reads, 1550.0 reads per million, 132 experiments

gggccucuguggaCAUCUUACCGGACAGUGCUGGAuuucucggcucgacucUAACACUGUCUGGUAACGAUGUUcaaaggugaccc
((((.(((.(((((((((((((((((((((.((((....(((...))).)))).))))))))))))).)))))))).))).).)))

Structure

   - c   g        -             C    uuuc   g 
ggg c ucu uggaCAUC UUACCGGACAGUG UGGA    ucg  
||| | ||| |||||||| ||||||||||||| ||||    ||| c
ccc g gga acUUGUAG AAUGGUCUGUCAC AUcu    agc  
   a u   a        C             A    ---c   u 

Annotation confidence High

Genome context

chr12: 49326773-49326858 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oar-mir-200a

Mature oar-miR-200a-5p

• Accession: MIMAT0052531
• Description: Ovis aries oar-miR-200a-5p mature miRNA
• Sequence: 14 - CAUCUUACCGGACAGUGCUGGA - 35
• Evidence: experimental ; cloned [1]

Mature oar-miR-200a-3p

• Accession: MIMAT0030042
• Description: Ovis aries oar-miR-200a-3p mature miRNA
• Sequence: 52 - UAACACUGUCUGGUAACGAUGUU - 74
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23269700
   MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
   "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
   "Physiol Genomics (2013) 45:151-161