Stem-loop oar-mir-200a

Accession

MI0025264

Description

Ovis aries oar-mir-200a precursor miRNA

Literature search

7 open access papers mention oar-mir-200a
(11 sentences)

Sequence

23739 reads, 6427 reads per million, 13 experiments

gggccucuguggacaucuuaccggacagugcuggauuucucggcucgacucuAACACUGUCUGGUAACGAUguucaaaggugaccc
((((.(((.(((((((((((((((((((((.((((....(((...))).)))).))))))))))))).)))))))).))).).)))

Structure

   - c   g        -             c    uuuc   g 
ggg c ucu uggacauc uuaccggacagug ugga    ucg  
||| | ||| |||||||| ||||||||||||| ||||    ||| c
ccc g gga acuugUAG AAUGGUCUGUCAC Aucu    agc  
   a u   a        C             A    ---c   u 

Annotation confidence Low

Genome context

chr12: 49326773-49326858 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oar-mir-200a

Mature oar-miR-200a

• Accession: MIMAT0030042
• Description: Ovis aries oar-miR-200a mature miRNA
• Sequence: 53 - AACACUGUCUGGUAACGAU - 71
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23269700
   MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
   "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
   "Physiol Genomics (2013) 45:151-161