Stem-loop oar-mir-200b

Accession

MI0025265

Description

Ovis aries oar-mir-200b precursor miRNA

Literature search

22 open access papers mention oar-mir-200b
(37 sentences)

Sequence

3418487 reads, 3092.0 reads per million, 134 experiments

cCAUCUUACUGGGCAGCAUUGGAuggugucuggucucUAAUACUGCCUGGUAAUGAUGa
.(((((((((((((((.((((((.((.......)))))))).))))))))))).)))).

Structure

c    -           C      u  ug 
 CAUC UUACUGGGCAG AUUGGA gg  u
 |||| ||||||||||| |||||| ||  c
 GUAG AAUGGUCCGUC UAAUcu cu  u
a    U           A      -  gg 

Annotation confidence High

Genome context

chr12: 49327356-49327414 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oar-mir-200b

Mature oar-miR-200b-5p

• Accession: MIMAT0052532
• Description: Ovis aries oar-miR-200b-5p mature miRNA
• Sequence: 2 - CAUCUUACUGGGCAGCAUUGGA - 23
• Evidence: experimental ; cloned [1]

Mature oar-miR-200b-3p

• Accession: MIMAT0030043
• Description: Ovis aries oar-miR-200b-3p mature miRNA
• Sequence: 38 - UAAUACUGCCUGGUAAUGAUG - 58
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23269700
   MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
   "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
   "Physiol Genomics (2013) 45:151-161