Stem-loop oar-mir-200c

Accession

MI0025266

Description

Ovis aries oar-mir-200c precursor miRNA

Literature search

31 open access papers mention oar-mir-200c
(70 sentences)

Sequence

1178688 reads, 1220.0 reads per million, 123 experiments

CGUCUUACCCAGCAGUGUUUGGgugcugguugggagucucUAAUACUGCCGGGUAAUGAUGGagg
((((((((((.((((((((.(((.(((.......)))))).)))))))).)))))).))))....

Structure

----    -      A        U   u   gg 
    CGUC UUACCC GCAGUGUU GGg gcu  u
    |||| |||||| |||||||| ||| |||  u
    GUAG AAUGGG CGUCAUAA cuc uga  g
ggaG    U      C        U   -   gg 

Annotation confidence High

Genome context

chr3: 207226030-207226094 [-]

Mature oar-miR-200c-5p

• Accession: MIMAT0052533
• Description: Ovis aries oar-miR-200c-5p mature miRNA
• Sequence: 1 - CGUCUUACCCAGCAGUGUUUGG - 22
• Evidence: experimental ; cloned [1]

Mature oar-miR-200c-3p

• Accession: MIMAT0030044
• Description: Ovis aries oar-miR-200c-3p mature miRNA
• Sequence: 41 - UAAUACUGCCGGGUAAUGAUGG - 62
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23269700
   MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
   "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
   "Physiol Genomics (2013) 45:151-161