Stem-loop oar-mir-23a

Accession

MI0025270

Description

Ovis aries oar-mir-23a precursor miRNA

Literature search

33 open access papers mention oar-mir-23a
(40 sentences)

Sequence

2592353 reads, 7766.0 reads per million, 143 experiments

ggccggcuGGGGUUCCUGGGGAUGGGAUUUgcugccugucacaaAUCACAUUGCCAGGGAUUUCCAaccgacc
((.(((.((((((((((((.((((.((((((.((.....)))))))).)))).))))))).))))).))).))

Structure

  c   c     -       G    G      c  c 
gg cgg uGGGG UUCCUGG GAUG GAUUUg ug c
|| ||| ||||| ||||||| |||| |||||| || u
cc gcc ACCUU AGGGACC UUAC CUAaac ac g
  a   a     U       G    A      -  u 

Annotation confidence High

Genome context

chr5: 9882124-9882196 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oar-mir-23a

Mature oar-miR-23a-5p

• Accession: MIMAT0052537
• Description: Ovis aries oar-miR-23a-5p mature miRNA
• Sequence: 9 - GGGGUUCCUGGGGAUGGGAUUU - 30
• Evidence: experimental ; cloned [1]

Mature oar-miR-23a-3p

• Accession: MIMAT0030048
• Description: Ovis aries oar-miR-23a-3p mature miRNA
• Sequence: 45 - AUCACAUUGCCAGGGAUUUCCA - 66
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23269700
   MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
   "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
   "Physiol Genomics (2013) 45:151-161