Stem-loop oar-mir-27a

Accession

MI0025275

Description

Ovis aries oar-mir-27a precursor miRNA

Literature search

37 open access papers mention oar-mir-27a
(98 sentences)

Sequence

27643350 reads, 37711.0 reads per million, 143 experiments

uggccuggggagcAGGGCUUAGCUGCUUGUGAGCAgguccacaucaagucgugUUCACAGUGGCUAAGUUCCGCcccc
......((((.((.(((((((((((((.(((((((.(.(........).).)))))))))))))))))))).))))))

Structure

uggccu    a  A             U       g u cac 
      gggg gc GGGCUUAGCUGCU GUGAGCA g c   a
      |||| || ||||||||||||| ||||||| | |    
      cccc CG CUUGAAUCGGUGA CACUUgu c g   u
------    -  C             -       g u aac 

Annotation confidence High

Genome context

chr5: 9882298-9882375 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oar-mir-27a

Mature oar-miR-27a-5p

• Accession: MIMAT0061458
• Description: Ovis aries oar-miR-27a-5p mature miRNA
• Sequence: 14 - AGGGCUUAGCUGCUUGUGAGCA - 35
• Evidence: experimental ; cloned [1]

Mature oar-miR-27a-3p

• Accession: MIMAT0030053
• Description: Ovis aries oar-miR-27a-3p mature miRNA
• Sequence: 54 - UUCACAGUGGCUAAGUUCCGC - 74
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23269700
   MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
   "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
   "Physiol Genomics (2013) 45:151-161