Stem-loop oar-mir-30b

Accession

MI0025278

Description

Ovis aries oar-mir-30b precursor miRNA

Literature search

19 open access papers mention oar-mir-30b
(42 sentences)

Sequence

2407931 reads, 5737.0 reads per million, 143 experiments

ccaaguuuccaguucaUGUAAACAUCCUACACUCAGCUguaacacuugagucggCUGGGAGGUGGAUGUUUACUUCagcugacuugga
((((((...(((((...((((((((((.((.((((((((..((......))))))))))..))))))))))))...))))))))))).

Structure

-      uuc     caU          U  -A        ua  ac 
 ccaagu   caguu   GUAAACAUCC AC  CUCAGCUg  ac  u
 ||||||   |||||   |||||||||| ||  ||||||||  ||   
 gguuca   gucga   CAUUUGUAGG UG  GGGUCggc  ug  u
a      ---     CUU          -  GA        --  ag 

Annotation confidence High

Genome context

chr9: 19941548-19941635 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oar-mir-30b

Mature oar-miR-30b-5p

• Accession: MIMAT0030057
• Description: Ovis aries oar-miR-30b-5p mature miRNA
• Sequence: 17 - UGUAAACAUCCUACACUCAGCU - 38
• Evidence: experimental ; cloned [1]

Mature oar-miR-30b-3p

• Accession: MIMAT0061459
• Description: Ovis aries oar-miR-30b-3p mature miRNA
• Sequence: 55 - CUGGGAGGUGGAUGUUUACUUC - 76
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23269700
   MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
   "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
   "Physiol Genomics (2013) 45:151-161