Stem-loop oar-mir-30c

Accession

MI0025279

Description

Ovis aries oar-mir-30c precursor miRNA

Literature search

16 open access papers mention oar-mir-30c
(28 sentences)

Sequence

4506560 reads, 8711.0 reads per million, 143 experiments

cagacuguaaccaugccguagugugUGUAAACAUCCUACACUCUCAGCUgugagcucgagguggCUGGGAGAGGGUUGUUUACUCCUucugccauggaaaacguc
..(((.((..(((((..((((...(.(((((((.(((...(((((((((....(((...)))))))))))).))).))))))).)...)))))))))...)))))

Structure

ca   u  -aa     cc    ugu U       U   ACA         guga   c 
  gac gu   ccaug  guag   g GUAAACA CCU   CUCUCAGCU    gcu  
  ||| ||   |||||  ||||   | ||||||| |||   |||||||||    ||| g
  cug ca   gguac  cguc   C CAUUUGU GGG   GAGGGUCgg    ugg  
--   -  aaa     --    uUC U       U   --A         ----   a 

Annotation confidence High

Genome context

chr1: 15038299-15038403 [+]

Mature oar-miR-30c-5p

• Accession: MIMAT0030058
• Description: Ovis aries oar-miR-30c-5p mature miRNA
• Sequence: 26 - UGUAAACAUCCUACACUCUCAGCU - 49
• Evidence: experimental ; cloned [1]

Mature oar-miR-30c-3p

• Accession: MIMAT0052538
• Description: Ovis aries oar-miR-30c-3p mature miRNA
• Sequence: 65 - CUGGGAGAGGGUUGUUUACUCCU - 87
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23269700
   MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
   "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
   "Physiol Genomics (2013) 45:151-161