Stem-loop oar-mir-30c

Accession

MI0025279

Description

Ovis aries oar-mir-30c precursor miRNA

Literature search

2 open access papers mention oar-mir-30c
(4 sentences)

Sequence

123897 reads, 25538 reads per million, 13 experiments

cagacuguaaccaugccguagugugUGUAAACAUCCUACACUCUCAgcugugagcucgagguggcugggagaggguuguuuacuccuucugccauggaaaacguc
..(((.((..(((((..((((...(.(((((((.(((...(((((((((....(((...)))))))))))).))).))))))).)...)))))))))...)))))

Structure

ca   u  -aa     cc    ugu U       U   ACA         guga   c 
  gac gu   ccaug  guag   g GUAAACA CCU   CUCUCAgcu    gcu  
  ||| ||   |||||  ||||   | ||||||| |||   |||||||||    ||| g
  cug ca   gguac  cguc   c cauuugu ggg   gagggucgg    ugg  
--   -  aaa     --    uuc u       u   --a         ----   a 

Annotation confidence Low

Genome context

chr1: 15038299-15038403 [+]

Mature oar-miR-30c

• Accession: MIMAT0030058
• Description: Ovis aries oar-miR-30c mature miRNA
• Sequence: 26 - UGUAAACAUCCUACACUCUCA - 46
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23269700
   MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
   "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
   "Physiol Genomics (2013) 45:151-161