Stem-loop oar-mir-30d

Accession

MI0025280

Description

Ovis aries oar-mir-30d precursor miRNA

Literature search

23 open access papers mention oar-mir-30d
(35 sentences)

Sequence

16829147 reads, 23858.0 reads per million, 143 experiments

guuguUGUAAACAUCCCCGACUGGAAGCUguaccacacagcuaagCUUUCAGUCAGAUGUUUGCUGCUac
...((.(((((((((...(((((((((((..............))))))))))).))))))))).))...

Structure

guu  U         CCC           guacca 
   gu GUAAACAUC   GACUGGAAGCU      c
   || |||||||||   |||||||||||       
   CG CGUUUGUAG   CUGACUUUCga      a
caU  U         --A           aucgac 

Annotation confidence High

Genome context

chr9: 19937109-19937178 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oar-mir-30d

Mature oar-miR-30d-5p

• Accession: MIMAT0030059
• Description: Ovis aries oar-miR-30d-5p mature miRNA
• Sequence: 6 - UGUAAACAUCCCCGACUGGAAGCU - 29
• Evidence: experimental ; cloned [1]

Mature oar-miR-30d-3p

• Accession: MIMAT0052539
• Description: Ovis aries oar-miR-30d-3p mature miRNA
• Sequence: 46 - CUUUCAGUCAGAUGUUUGCUGCU - 68
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23269700
   MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
   "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
   "Physiol Genomics (2013) 45:151-161