Stem-loop bdi-MIR166i

Accession

MI0025297

Description

Brachypodium distachyon bdi-MIR166i precursor miRNA

Literature search

2 open access papers mention bdi-MIR166i
(16 sentences)

Sequence

ucuuguugaggGGCAUGUCGUGUGGCCCGAGAccgguucauggccgucgaucggucggcuaaugucgccggcggcgcgcgucaguggauggucUCGGACCAGGCUUCAUUCCCCccaacggc
..((((((.((((.(((..((.(((.(((((((((.(((((((((((((.((((.((((....)))))))))))))...)))).))))))))))))).))).))..))).)))).)))))).

Structure

uc      a    C   UC  G   C         g    -    ---     a    u    u 
  uuguug ggGG AUG  GU UGG CCGAGAccg uuca uggc   cgucg ucgg cggc a
  |||||| |||| |||  || ||| ||||||||| |||| ||||   ||||| |||| ||||  
  ggcaac CCCC UAC  CG ACC GGCUcuggu aggu acug   gcggc ggcc gcug a
-c      c    U   UU  G   A         -    g    cgc     -    -    u 

Annotation confidence Not enough data

Genome context

3: 27457696-27457817 [-]

Mature bdi-miR166i-5p

• Accession: MIMAT0030089
• Description: Brachypodium distachyon bdi-miR166i-5p mature miRNA
• Sequence: 12 - GGCAUGUCGUGUGGCCCGAGA - 32
• Evidence: experimental ; Illumina [1]

Mature bdi-miR166i-3p

• Accession: MIMAT0030090
• Description: Brachypodium distachyon bdi-miR166i-3p mature miRNA
• Sequence: 94 - UCGGACCAGGCUUCAUUCCCC - 114
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443