Accession
MI0025302
Description
Brachypodium distachyon
bdi-MIR5167b precursor miRNA
Sequence
4804
reads,
31.0
reads per million, 20 experiments
gUCAUUCGUGCUCUAGUUAAGGUaauuuaacuagaagauagaaaucuagauuuuuuuauguuaccuuccaccauggcgcgacagaaaagaacgacauuggcaucgaggcacaugucguucgggaauuaacuuccaggaaagcaauauaaagaauuuagacuccuagccuucgagugugaauugccUUAACGAGAGCACCAAUGACA
((((((.(((((((.(((((((((((((((((.((((.(((...((((((((((((.(((((.(.((((....((......)).....(((((((((..((......))..)))))))))((((......)))).)))).).)))))))))))))))))...)))..)))).))).)))))))))))))).))))))).)))))).
((((((.(((((((.(((((((((((((((((.((((.(((...((((((((((((.(((((.(.((((....((......)).....(((((((((..((......))..)))))))))((((......)))).)))).).)))))))))))))))))...)))..)))).))).)))))))))))))).))))))).)))))).
Structure
- C A - a -a aaa u a c accauggcgcgacagaaaa ug au gUCAUU GUGCUCU GUUAAGGUaauuua acu gaag uag ucuagauuuuuu auguu c uucc gaacgacau gc c |||||| ||||||| |||||||||||||| ||| |||| ||| |||||||||||| ||||| | |||| ||||||||| || CAGUAA CACGAGA CAAUUccguuaagu uga cuuc auc agauuuaagaaa uauaa g aagg cuugcugua cg g A C G g g cg cuc - c a ----accuucaauuaaggg ca ga
Annotation confidence
High
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Genome context
4: 42129670-42129875 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bdi-MIR5167b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bdi-miR5167b-5p
| Accession | MIMAT0030099 |
| Description | Brachypodium distachyon bdi-miR5167b-5p mature miRNA |
| Sequence | 2 - UCAUUCGUGCUCUAGUUAAGGU - 23 |
| Evidence |
experimental
Illumina [1] |
Mature bdi-miR5167b-3p
| Accession | MIMAT0030100 |
| Description | Brachypodium distachyon bdi-miR5167b-3p mature miRNA |
| Sequence | 186 - UUAACGAGAGCACCAAUGACA - 206 |
| Evidence |
experimental
Illumina [1] |
References
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