Stem-loop bdi-MIR5174b

Accession

MI0025303

Description

Brachypodium distachyon bdi-MIR5174b precursor miRNA

Literature search

1 open access papers mention bdi-MIR5174b
(3 sentences)

Sequence

15245 reads, 120.0 reads per million, 21 experiments

auccacuacucccucuguuccauAAAGAUUGGCGCGGUUUUGAACUAgcccuaguucaaauuugugccaaccuUUAUGGAACGGAGGGAGUAuauaua
......(((((((((((((((((((((.(((((((((.(((((((((....))))))))).))))))))).)))))))))))))))))))))......

Structure

auccac                     A         U         g 
      uacucccucuguuccauAAAG UUGGCGCGG UUUGAACUA c
      ||||||||||||||||||||| ||||||||| |||||||||  
      AUGAGGGAGGCAAGGUAUUuc aaccguguu aaacuugau c
auauau                     c         u         c 

Annotation confidence Low

Genome context

3: 50778133-50778230 [-]

Mature bdi-miR5174b-5p

• Accession: MIMAT0030101
• Description: Brachypodium distachyon bdi-miR5174b-5p mature miRNA
• Sequence: 24 - AAAGAUUGGCGCGGUUUUGAACUA - 47
• Evidence: experimental ; Illumina [1]

Mature bdi-miR5174b-3p

• Accession: MIMAT0030102
• Description: Brachypodium distachyon bdi-miR5174b-3p mature miRNA
• Sequence: 74 - UUAUGGAACGGAGGGAGUA - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443