Stem-loop bdi-MIR5185e

Accession

MI0025309

Description

Brachypodium distachyon bdi-MIR5185e precursor miRNA

Literature search

1 open access papers mention bdi-MIR5185e
(1 sentences)

Sequence

7325 reads, 73.0 reads per million, 21 experiments

ggaucccgugaaagUCCCGCUUCUAGUUCAUUUUUcaaaucuucuauucaaaauuuuguucagaauuugaauaagagaUUUGAGAAUUGAACUAGAAGCgggacuuucgcgggau
..((((((((((((((((((((((((((((.((((((((((((.((((((((.((((....)))))))))))).)))))))))))).))))))))))))))))))))))))))))

Structure

gg                            U            c        a    g 
  aucccgugaaagUCCCGCUUCUAGUUCA UUUUcaaaucuu uauucaaa uuuu u
  |||||||||||||||||||||||||||| |||||||||||| |||||||| ||||  
  uagggcgcuuucagggCGAAGAUCAAGU AAGAGUUUagag auaaguuu aaga u
--                            U            a        -    c 

Annotation confidence Low

Genome context

1: 50946307-50946421 [-]

Mature bdi-miR5185e-5p

• Accession: MIMAT0030113
• Description: Brachypodium distachyon bdi-miR5185e-5p mature miRNA
• Sequence: 15 - UCCCGCUUCUAGUUCAUUUUU - 35
• Evidence: experimental ; Illumina [1]

Mature bdi-miR5185e-3p

• Accession: MIMAT0030114
• Description: Brachypodium distachyon bdi-miR5185e-3p mature miRNA
• Sequence: 79 - UUUGAGAAUUGAACUAGAAGC - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443