Stem-loop bdi-MIR5185j

Accession

MI0025314

Description

Brachypodium distachyon bdi-MIR5185j precursor miRNA

Literature search

1 open access papers mention bdi-MIR5185j
(1 sentences)

Sequence

gcaaguccugcUUCUAGUUCAUUUUUCAAAUCuucuauucaaaauuuuguucagaauuugaauaggagaUUUGAGAAUUGAACUAGAAGCgggacuuucgc
(.(((((((((((((((((((.(((((((((((((((((((((.((((....))))))))))))))))))))))))).))))))))))))))))))).)..

Structure

-- c                   U                     a    g 
  g aaguccugcUUCUAGUUCA UUUUCAAAUCuucuauucaaa uuuu u
  | ||||||||||||||||||| ||||||||||||||||||||| ||||  
  c uucagggCGAAGAUCAAGU AAGAGUUUagaggauaaguuu aaga u
cg u                   U                     -    c 

Annotation confidence Not enough data

Genome context

5: 9614368-9614468 [-]

Mature bdi-miR5185j-5p

• Accession: MIMAT0030123
• Description: Brachypodium distachyon bdi-miR5185j-5p mature miRNA
• Sequence: 12 - UUCUAGUUCAUUUUUCAAAUC - 32
• Evidence: experimental ; Illumina [1]

Mature bdi-miR5185j-3p

• Accession: MIMAT0030124
• Description: Brachypodium distachyon bdi-miR5185j-3p mature miRNA
• Sequence: 70 - UUUGAGAAUUGAACUAGAAGC - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443