Accession
MI0025319
Description
Brachypodium distachyon
bdi-MIR7708a precursor miRNA
Sequence
14941
reads,
90.0
reads per million, 21 experiments
cagaacacaccauccgauuguguuuuuccucaguaccguuacaAUUUUGUAGACAUUUGCACAGCACgccagcuagucuaaaauggaaaguuugacuuuuuuccccucaggauggcgcuuuuugcuugggaggacgacgguuuugcaccauuuuuuucucuaauugaaaauuuggccccaaaagacgguacguaagugucaacuuuggacauuauuugauuaaaaaauuguucagcauuuagccucaaguugaaucacaacaguccacaaaaucauagguuuaaaauucaggucggggguauuguggaaaaaguaacacuuuucguuuuaggccaaguaauguguuguggcaaaugauCACAAAAUUGUAAUGGUACUGAacaaagacgcaauccggcgguguguuucg
..(((((((((.((.((((((((((((..(((((((((((((((((((((.(((((((((((((((((...(((.((((((((((((((((...(((((((((.((((.....((((.....))))...))))(((((.(((((...(((..(((((........)))))..)))......))))).)).)))((((....))))((((((...(((.....)))...))))))(((..((.((((.(.((((((.........((...........))......)))))).).)))).)).))))))))))))...))))))))))))))))..)))..)))))))).))))))).)))))))))))))))))))))))..)))))))))))).)).)))))))))..
..(((((((((.((.((((((((((((..(((((((((((((((((((((.(((((((((((((((((...(((.((((((((((((((((...(((((((((.((((.....((((.....))))...))))(((((.(((((...(((..(((((........)))))..)))......))))).)).)))((((....))))((((((...(((.....)))...))))))(((..((.((((.(.((((((.........((...........))......)))))).).)))).)).))))))))))))...))))))))))))))))..)))..)))))))).))))))).)))))))))))))))))))))))..)))))))))))).)).)))))))))..
Structure
ca a c cc A - - cca -a uug cccucaggauggcgcuuuuugcuugggaggacgacgguuuugcaccauuuuuuucucuaauugaaaauuuggccccaaaagacgguacguaagugucaacuuuggacauuauuugauuaaaaaauuguuca uu g a g cacaacagu acaa gaacacacc uc gauuguguuuuu ucaguaccguuacaAUUUUGU GA CAUUUGC ACAGCACg gcu gucuaaaauggaaagu acuuuuuuc gca ua ccuc a uugaau cc a ||||||||| || |||||||||||| ||||||||||||||||||||| || ||||||| |||||||| ||| |||||||||||||||| ||||||||| ||| || |||| | |||||| || a uuugugugg gg cuaacgcagaaa AGUCAUGGUAAUGUUAAAACA Cu guaaacg uguugugu uga cggauuuugcuuuuca ugaaaaagg ugu au gggg u gacuua gg u gc c c ca - a g -aa ac caa ----------------------------------------------------------------------------------------------------------------------------------- -u g c g ---aaauuu auac
Annotation confidence
Low
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Genome context
4: 31535894-31536302 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bdi-MIR7708a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bdi-miR7708a-5p
| Accession | MIMAT0030133 |
| Description | Brachypodium distachyon bdi-miR7708a-5p mature miRNA |
| Sequence | 44 - AUUUUGUAGACAUUUGCACAGCAC - 67 |
| Evidence |
experimental
Illumina [1] |
Mature bdi-miR7708a-3p
| Accession | MIMAT0030134 |
| Description | Brachypodium distachyon bdi-miR7708a-3p mature miRNA |
| Sequence | 359 - CACAAAAUUGUAAUGGUACUGA - 380 |
| Evidence |
experimental
Illumina [1] |
References
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