Stem-loop bdi-MIR7724b

Accession

MI0025338

Description

Brachypodium distachyon bdi-MIR7724b precursor miRNA

Sequence

3980 reads, 41.0 reads per million, 15 experiments

uuuggcagAGAGUGAACAUGUACAUGCUGGCCaacccaaccccacgauccaccaucggcaugagcaugauguguguucucaaaugucaggccaguaaaucaccaugcucgugcugguaaaggguggagggcuugggUUGGCCCACAUUGACAUGUUCACCcugugcuugu
...((((.((.((((((((((..(((..(((((((((((.(((....(((((((((((((((((((((.((..((.(((........))).))......)).)))))))))))))))....))))))))).)))))))))))..)))..)))))))))).)).))))...

Structure

uuu    g  A          AC   CU           c   acga      ----               a  ----ug  u   caa 
   ggca AG GUGAACAUGU  AUG  GGCCaacccaa ccc    uccacc    aucggcaugagcaug ug      ug ucu   a
   |||| || ||||||||||  |||  ||||||||||| |||    ||||||    ||||||||||||||| ||      || |||    
   ucgu uc CACUUGUACA  UAC  CCGGUUggguu ggg    aggugg    uggucgugcucguac ac      ac gga   u
ugu    g  C          GU   AC           c   ----      gaaa               c  uaaaug  c   cug 

Annotation confidence Medium

Genome context

1: 56080928-56081097 [-]

Mature bdi-miR7724b-5p

• Accession: MIMAT0030176
• Description: Brachypodium distachyon bdi-miR7724b-5p mature miRNA
• Sequence: 9 - AGAGUGAACAUGUACAUGCUGGCC - 32
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7724b-3p

• Accession: MIMAT0030177
• Description: Brachypodium distachyon bdi-miR7724b-3p mature miRNA
• Sequence: 137 - UUGGCCCACAUUGACAUGUUCACC - 160
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443