Stem-loop bdi-MIR7727

Accession

MI0025342

Description

Brachypodium distachyon bdi-MIR7727 precursor miRNA

Sequence

936 reads, 7.0 reads per million, 20 experiments

ugggcgaagcugauuaguuucaguuggucugggcgaaguUGAUUAGUUCCAGUUGGUgucguccaagucgAUUGGAACUAAUGAGCUUcccaaaacua
..((.((((((.(((((((((((((((..(((((((..((((((......))))))..)))))))..))))))))))))))).)))))))).......

Structure

-----ug  c      g               uc       ag      AG 
       gg gaagcu auuaguuucaguugg  ugggcga  uUGAUU  U
       || |||||| |||||||||||||||  |||||||  ||||||   
       cc cUUCGA UAAUCAAGGUUAgcu  accugcu  GGUUGA  U
aucaaaa  -      G               ga       gU      CC 

Annotation confidence Low

Genome context

5: 13610099-13610196 [+]

Mature bdi-miR7727-5p

• Accession: MIMAT0030186
• Description: Brachypodium distachyon bdi-miR7727-5p mature miRNA
• Sequence: 40 - UGAUUAGUUCCAGUUGGU - 57
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7727-3p

• Accession: MIMAT0030187
• Description: Brachypodium distachyon bdi-miR7727-3p mature miRNA
• Sequence: 71 - AUUGGAACUAAUGAGCUU - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443