Stem-loop bdi-MIR7734

Accession

MI0025350

Description

Brachypodium distachyon bdi-MIR7734 precursor miRNA

Sequence

ccucuacggcaUUGAACGUGACUGGGUUAACGccauauggcuugacguuaaagaaaaaacgugguaguuucaugagcaaccgaugguuuuugcgggggucaacgccaagguccauggcguuuuuuuuuugugaaaagccaagguccauggggggccccccccccccccccccccccaaaaaaaacuggaaucgacuuuucugggguguaaaauugacguuuuggggggucaacgccauggucuguggcguugagcuccaacaccccaacgccacgaaauugcucaguuuuuucaacgccaggcuauaugccgUUAACCUAGUCACAUUCAACGccauaguugu
...(((.(((.(((((.(((((((((((((((.(((((((((((.((((...((((((((..(((((((((.((.((...(((((((((((..(((((..........((.((.((((.((((........)))).)))).)).))..((((((......)))))).....)))))...)))))))...)))).......(((((((((((((....))))).((((.((((((((((.....)))))))))).)))).))))))))..)))).)))))))))..)))))))))))).))))))))))).))))))))))))))).))))).))).)))....

Structure

-ccu   c   a     C               c           a    aaa        gu         a  a  aaccgaugguuuuugcgggggucaacgccaagguccauggcguuuuuuuuuugugaaaagccaagguccauggggggccccccccccccccccccccccaaaaaaaacuggaaucgacuuuuc        aaaauugacguuuug    g          g 
    cua ggc UUGAA GUGACUGGGUUAACG cauauggcuug cguu   gaaaaaac  gguaguuuc ug gc                                                                                                                           uggggugu               gggg ucaacgccau g
    ||| ||| ||||| ||||||||||||||| ||||||||||| ||||   ||||||||  ||||||||| || ||                                                                                                                           ||||||||               |||| |||||||||| u
    gau ccG AACUU CACUGAUCCAAUUgc guauaucggac gcaa   cuuuuuug  ucguuaaag ac cg                                                                                                                           accccaca               ccuc aguugcggug c
uguu   a   C     A               c           c    ---        ac         c  -  -------------------------------------------------------------------------------------------------------------------------ca        --------------a    g          u 

Annotation confidence Not enough data

Genome context

1: 46850031-46850373 [-]

Mature bdi-miR7734-5p

• Accession: MIMAT0030202
• Description: Brachypodium distachyon bdi-miR7734-5p mature miRNA
• Sequence: 12 - UUGAACGUGACUGGGUUAACG - 32
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7734-3p

• Accession: MIMAT0030203
• Description: Brachypodium distachyon bdi-miR7734-3p mature miRNA
• Sequence: 313 - UUAACCUAGUCACAUUCAACG - 333
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443