Stem-loop bdi-MIR7735

Accession

MI0025352

Description

Brachypodium distachyon bdi-MIR7735 precursor miRNA

Sequence

2561 reads, 33.0 reads per million, 21 experiments

gguaaacgucguuguuuuccuucugcacucccggcggcacgcccgugagcgagcucGAUGCUGCAUCUGGACCUCGGAACCacgucggagccagaaaaacguuauugacguagcagccuggaAGUCGCCGGUCGGAGCCAagagacgcggcgacaaugaucu
(((....((((((((.((.(((..((.((.((((((((.(((......)))...((.(.(((((.(((((..(((.((......)).))))))))...(((((...))))).))))).).)).))))))))..)).)).))).)).))))))))....))).

Structure

-   aaac        u  c   cu  a  -c        acgcccgugagcgagc  G U     ----------------A     AC   G  AC 
 ggu    gucguugu uu cuu  gc cu  ccggcggc                uc A GCUGC                 UCUGG  CUC GA  C
 |||    |||||||| || |||  || ||  ||||||||                || | |||||                 |||||  ||| ||   
 cua    cagcggcg ag gaA  CG GG  GGCCGCUG                ag u cgacg                 agacc  gag cu  a
u   guaa        c  a   -C  A  CU        ---------------A  g c     augcaguuauugcaaaa     --   g  gc 

Annotation confidence Low

Genome context

1: 48106343-48106504 [+]

Mature bdi-miR7735-5p

• Accession: MIMAT0030206
• Description: Brachypodium distachyon bdi-miR7735-5p mature miRNA
• Sequence: 57 - GAUGCUGCAUCUGGACCUCGGAACC - 81
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7735-3p

• Accession: MIMAT0030207
• Description: Brachypodium distachyon bdi-miR7735-3p mature miRNA
• Sequence: 123 - AGUCGCCGGUCGGAGCCA - 140
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443