Stem-loop bdi-MIR7726b

Accession

MI0025358

Description

Brachypodium distachyon bdi-MIR7726b precursor miRNA

Sequence

16060 reads, 122.0 reads per million, 21 experiments

auaacgaacgguggcauAUUGACUGUAAUUUUGAUGACAUGacguacggcggcggucguaccaucacuaccaacuccaauuuaauauauuggUGGUGAUGGUACGGUCGUugcgauacgucacuucaccgaaauuacaaaucugccaccguuguccccac
......((((((((((.(((...((((((((((.(((..(((((((..(((((((((((((((((((((((((...............)))))))))))))))))))))))))..)))))))..))).))))))))))))).))))))))))........

Structure

--auaacg          u   GAC          A   CA       cg                         cuccaa 
        aacgguggca AUU   UGUAAUUUUG UGA  UGacgua  gcggcggucguaccaucacuaccaa      u
        |||||||||| |||   |||||||||| |||  |||||||  |||||||||||||||||||||||||      u
        uugccaccgu uaa   acauuaaagc acu  acugcau  cguUGCUGGCAUGGUAGUGGUgguu      u
caccccug          c   ---          c   uc       ag                         auauaa 

Annotation confidence Medium

Genome context

1: 60124988-60125147 [-]

Mature bdi-miR7726b-5p

• Accession: MIMAT0030218
• Description: Brachypodium distachyon bdi-miR7726b-5p mature miRNA
• Sequence: 18 - AUUGACUGUAAUUUUGAUGACAUG - 41
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7726b-3p

• Accession: MIMAT0030219
• Description: Brachypodium distachyon bdi-miR7726b-3p mature miRNA
• Sequence: 93 - UGGUGAUGGUACGGUCGU - 110
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443