Stem-loop bdi-MIR7741

Accession

MI0025359

Description

Brachypodium distachyon bdi-MIR7741 precursor miRNA

Sequence

141515 reads, 1259.0 reads per million, 21 experiments

agcuacauaauuuuUAAUUGUGGAAGCUCUUGAAGuuucgcaugcaguuccucuauauuccugucugucaaguugagaucgcaacccugcacuggccaugcugccaccucgaggucacccaucauuugacucaucucaguucacUGCAUGUGGAACUUCCAGAUCuuccaugaguaaaaauccuguagcuuccaaggcaa
(((((((..(((((((.(((((((((.(((.(((((((((((((((((............(((...(((((((.((....(..(((.((...((((......))))...)).)))..)...)))))))))......)))...))))))))))))))))).))).))))))))).)))))))..)))))))..........

Structure

----------       ua       A         C   U                 uccucuauauuc   ---ucu       u  gauc ca   c  cac    ca 
          agcuaca  auuuuUA UUGUGGAAG UCU GAAGuuucgcaugcagu            cug      gucaagu ga    g  acc ug   uggc  u
          |||||||  ||||||| ||||||||| ||| |||||||||||||||||            |||      ||||||| ||    |  ||| ||   ||||   
          ucgaugu  uaaaaau aguaccuuC AGA CUUCAAGGUGUACGUca            gac      caguuua cu    c  ugg gc   accg  g
aacggaaccu       cc       g         U   C                 ---------cuu   ucuacu       -  -acc ac   a  ucc    uc 

Annotation confidence Low

Genome context

1: 39792972-39793171 [+]

Mature bdi-miR7741-5p

• Accession: MIMAT0030220
• Description: Brachypodium distachyon bdi-miR7741-5p mature miRNA
• Sequence: 15 - UAAUUGUGGAAGCUCUUGAAG - 35
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7741-3p

• Accession: MIMAT0030222
• Description: Brachypodium distachyon bdi-miR7741-3p mature miRNA
• Sequence: 145 - UGCAUGUGGAACUUCCAGAUC - 165
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443