Stem-loop bdi-MIR7743

Accession

MI0025361

Description

Brachypodium distachyon bdi-MIR7743 precursor miRNA

Sequence

2957 reads, 19.0 reads per million, 21 experiments

aUUGGAAAUUAGCAUCUACUGAUAguuugacugcauguuuggaaauuagcauauucuuucuauggguucuagacuUUUGGAUGUAUACAAAUUUGCUCuauguuuugaacuuuuguauuggaucuuuucugguuagaa
((((((((..((.(((((.((..(((((((..((((((((((((.....((((.......))))..))))))))....(((.(((........)))))))))).)))))))....)).))))))))))))))).....

Structure

-----        UU  C     C  --AU       cu    guuuggaaauuagcauauucuuucuauggguucuagacuUUU   U   UAC 
     aUUGGAAA  AG AUCUA UG    Aguuuga  gcau                                          GGA GUA   A
     ||||||||  || ||||| ||    |||||||  ||||                                          ||| |||    
     uggucuuu  uc uaggu au    ucaaguu  ugua                                          uCU CGU   A
aagau        --  -     u  guuu       -u    ------------------------------------------   -   UUA 

Annotation confidence Low

Genome context

5: 17786144-17786281 [+]

Mature bdi-miR7743-5p

• Accession: MIMAT0030226
• Description: Brachypodium distachyon bdi-miR7743-5p mature miRNA
• Sequence: 2 - UUGGAAAUUAGCAUCUACUGAUA - 24
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7743-3p

• Accession: MIMAT0030227
• Description: Brachypodium distachyon bdi-miR7743-3p mature miRNA
• Sequence: 76 - UUUGGAUGUAUACAAAUUUGCUC - 98
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443