Stem-loop bdi-MIR7747

Accession

MI0025365

Description

Brachypodium distachyon bdi-MIR7747 precursor miRNA

Sequence

auuaucacgggAUCAGAUUGUUUUGUUGUAGGAUGaugaaguguuguucgccgaucggauuguauguuguguucuuggacuaugauaguuuaugucgaaugcacuuuugauuuucagauugugcguacuguaguuuacucuagaucguguguaucgcagauuuucauguuccucuucaagaguuucuaaaagagagaauacgaaaaucuguaguacacacaaucugaaaaacaaaaguacauucaacacugccauaguucgacaacaaaacacauauucugaucggcagacgacacuucAUCCUAUAACAAAACAAACUGAUCucuuacuaau
........((((((((.(((((((((((((((((((...(((((((((.((((((((((.(((.((((.((((.((((((((((.((((....((.(((((.(((((((.(((((((((((((((..(((.((....)).)))..)))((((((.((((((((((.((((((((((..(((...)))..))))).))))).)))))))))).)))))))))))))))))).))))))).))))).)))))).)))))))))).)))).)))).))).)))))))))).)))))))))))))))))))))))))))).))))))))........

Structure

auuaucac        A                   uga         c          u   a    g    c          a    uuau  c     c       a            gcguacuguaguuuacucuagaucgu      c          a     -     ca   g 
        gggAUCAG UUGUUUUGUUGUAGGAUGa   aguguuguu gccgaucgga ugu uguu uguu uuggacuaug uagu    gu gaaug acuuuug uuuucagauugu                          guguau gcagauuuuc uguuc cucuu  aga  
        |||||||| |||||||||||||||||||   ||||||||| |||||||||| ||| |||| |||| |||||||||| ||||    || ||||| ||||||| ||||||||||||                          |||||| |||||||||| ||||| |||||  ||| u
        cuCUAGUC AACAAAACAAUAUCCUAcu   ucacagcag cggcuagucu aua acaa acaa agcuugauac guca    ca cuuac ugaaaac aaaagucuaaca                          cacaug ugucuaaaag auaag gagaa  ucu  
uaaucauu        A                   ---         a          u   c    a    c          c    ----  a     a       a            --------------------------      a          c     a     aa   u 

Annotation confidence Not enough data

Genome context

1: 53276108-53276440 [-]

Mature bdi-miR7747-5p

• Accession: MIMAT0030234
• Description: Brachypodium distachyon bdi-miR7747-5p mature miRNA
• Sequence: 12 - AUCAGAUUGUUUUGUUGUAGGAUG - 35
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7747-3p

• Accession: MIMAT0030235
• Description: Brachypodium distachyon bdi-miR7747-3p mature miRNA
• Sequence: 300 - AUCCUAUAACAAAACAAACUGAUC - 323
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443