Accession
MI0025372
Description
Brachypodium distachyon
bdi-MIR7748b precursor miRNA
Sequence
1900
reads,
16.0
reads per million, 21 experiments
uccaacaauaugaggcAUGUUAGGAUUCGGUUGACCAAGCauuugaccacaacuuacuuuacgaaugugugacuaaugugaucaaaaucauaaccauaaacaaauauccuugaguaggaacauaaugaauaugauucuaugucauauaauuauauaucaauagaguaauuuguagucaaaguauuggucaaagaaaaucuaAUACGCCCCAUAUUGUUG
..((((((((((.(((.(((((((.(((..((((((((...((((((.((((.((((((((...((((((((...(((((((...(((((((..(((.........((((.....)))).....)))..)))))))....)))))))..))))))))...)))))))).)))).))))))...)))))))).)))..))))))).))).))))))))))
..((((((((((.(((.(((((((.(((..((((((((...((((((.((((.((((((((...((((((((...(((((((...(((((((..(((.........((((.....)))).....)))..)))))))....)))))))..))))))))...)))))))).)))).))))))...)))))))).)))..))))))).))).))))))))))
Structure
uc a A -A GG GCa c c cga cua -caa ac aaacaaaua u caacaauaug ggc UGUUAGG UUC UUGACCAA uuugac acaa uuacuuua auguguga augugau aaucaua cau uccu g |||||||||| ||| ||||||| ||| |||||||| |||||| |||| |||||||| |||||||| ||||||| ||||||| ||| |||| a GUUGUUAUAC CCG AUAaucu aag aacugguu aaacug uguu aaugagau uauauauu uauacug uuaguau gua agga g -- C C aa -a aug a u aac -aa uauc aa ----auaca u
Annotation confidence
Low
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Genome context
3: 16741357-16741575 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bdi-MIR7748b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bdi-miR7748b-5p
| Accession | MIMAT0030248 |
| Description | Brachypodium distachyon bdi-miR7748b-5p mature miRNA |
| Sequence | 17 - AUGUUAGGAUUCGGUUGACCAAGC - 40 |
| Evidence |
experimental
Illumina [1] |
Mature bdi-miR7748b-3p
| Accession | MIMAT0030249 |
| Description | Brachypodium distachyon bdi-miR7748b-3p mature miRNA |
| Sequence | 202 - AUACGCCCCAUAUUGUUG - 219 |
| Evidence |
experimental
Illumina [1] |
References
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