Stem-loop bdi-MIR7754

Accession

MI0025373

Description

Brachypodium distachyon bdi-MIR7754 precursor miRNA

Literature search

0 open access papers mention bdi-MIR7754
(0 sentences)

Sequence

26513 reads, 216.0 reads per million, 21 experiments

auuccucaaguaugUUCUCUCGGCUGAGGAACUGCuaaugggaucgaucgaaccugagucaagggagugaauauaaaaauauauacuccaugUUCUCUCGGCUAAGGAACUGCuaaugggauc
(((((...((((.((((.((.(((((((((((.(((...(((.((....)).))).)))....((((((.((((....)))).))))))..)))).))))))).))))))))))...))))).

Structure

-     uca    u    U  C       -    -------------------------------U   aau   a  g 
 auucc   agua gUUC CU GGCUGAG GAAC                                GCu   ggg uc a
 |||||   |||| |||| || ||||||| ||||                                |||   ||| ||  
 uaggg   uCGU CAAG GA UCGGCUC CUUg                                uga   ucc ag u
c     uaa    -    -  A       U    uaccucauauauaaaaauauaagugagggaac   --g   a  c 

Annotation confidence High

Genome context

3: 22735492-22735614 [-]

Mature bdi-miR7754-5p

• Accession: MIMAT0030250
• Description: Brachypodium distachyon bdi-miR7754-5p mature miRNA
• Sequence: 15 - UUCUCUCGGCUGAGGAACUGC - 35
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7754-3p

• Accession: MIMAT0030251
• Description: Brachypodium distachyon bdi-miR7754-3p mature miRNA
• Sequence: 93 - UUCUCUCGGCUAAGGAACUGC - 113
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443