Stem-loop bdi-MIR7755

Accession

MI0025374

Description

Brachypodium distachyon bdi-MIR7755 precursor miRNA

Sequence

2474 reads, 22.0 reads per million, 21 experiments

augauauaagaacuaacaaUUCCACACUGUAAAUUGAAUAgaauguuuacuagauucgccuuuucaucugugcuagcaacaguuccagaacuagaacccucucaacaaagguucuagcucaggacaguuucuagcccagaugaaaagguauaucauguacguagcaaacauuauguucaauuUACGGUGUAGAAUUGUUUGUUguuauuucag
.(((.((((.(((.((((((((.(((((((((((((((((.(((((((.((((((..(((((((((((((.(((((.(((.((.((.((.((((((((...........)))))))).)).)))).))).))))).)))))))))))))..))).......))).))))))).))))))))))))))))).)))))))).))).)))).))).

Structure

a   u    g   u        C                 g       a   -------   uc             u     c   a  u  a  a        cucu 
 uga auaa aac aacaaUUC ACACUGUAAAUUGAAUA aauguuu cua       gau  gccuuuucaucug gcuag aac gu cc ga cuagaacc    c
 ||| |||| ||| |||||||| ||||||||||||||||| ||||||| |||       |||  ||||||||||||| ||||| ||| || || || ||||||||    a
 acu uauu UUG UUGUUAAG UGUGGCAUuuaacuugu uuacaaa gau       cua  uggaaaaguagac cgauc uug ca gg cu gaucuugg    a
g   u    g   U        A                 a       c   gcaugua   ua             c     u   a  -  a  c        aaac 

Annotation confidence Low

Genome context

2: 22520134-22520346 [-]

Mature bdi-miR7755-5p

• Accession: MIMAT0030252
• Description: Brachypodium distachyon bdi-miR7755-5p mature miRNA
• Sequence: 20 - UUCCACACUGUAAAUUGAAUA - 40
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7755-3p

• Accession: MIMAT0030253
• Description: Brachypodium distachyon bdi-miR7755-3p mature miRNA
• Sequence: 183 - UACGGUGUAGAAUUGUUUGUU - 203
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443