Stem-loop bdi-MIR7723b

Accession

MI0025375

Description

Brachypodium distachyon bdi-MIR7723b precursor miRNA

Sequence

auuaagaguucuAUUUUGAUACUACUACCUUCAUCAucuccucaugcagcuagaccaacacauugauauccuauuuguaaccccaacaauucuguaacuauuuauagaugaaggauuguugggguuaccgauggauccaauuugguugagcuaucgaagaagaagAUGAAGGUAGUAGUUUCAAAAUGGaaccuucaau
...(((.((((((((((((.(((((((((((((((.(((.((.....((((.((((((...((((..((((.(((.(((((((((((((((((....(((....)))....))))))))))))))))).))))))).)))))))))).)))).....)).))).))))))))))))))).)))))))))))))))....

Structure

-auu   a            U               A   c  caugc    a      cac    au    u   u                 guaa   u 
    aag guucuAUUUUGA ACUACUACCUUCAUC ucu cu     agcu gaccaa   auug  aucc auu guaaccccaacaauucu    cua u
    ||| |||||||||||| ||||||||||||||| ||| ||     |||| ||||||   ||||  |||| ||| |||||||||||||||||    |||  
    uuc caaGGUAAAACU UGAUGAUGGAAGUAg aga ga     ucga uugguu   uaac  uagg uag cauugggguuguuagga    gau u
uaac   -            U               a   a  agcua    g      ---    -c    -   c                 agua   a 

Annotation confidence Not enough data

Genome context

1: 55109092-55109290 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bdi-MIR7723b

Mature bdi-miR7723b-5p

• Accession: MIMAT0030254
• Description: Brachypodium distachyon bdi-miR7723b-5p mature miRNA
• Sequence: 13 - AUUUUGAUACUACUACCUUCAUCA - 36
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7723b-3p

• Accession: MIMAT0030255
• Description: Brachypodium distachyon bdi-miR7723b-3p mature miRNA
• Sequence: 166 - AUGAAGGUAGUAGUUUCAAAAUGG - 189
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443