Stem-loop bdi-MIR7766

Accession

MI0025387

Description

Brachypodium distachyon bdi-MIR7766 precursor miRNA

Sequence

700 reads, 7.0 reads per million, 20 experiments

ccuggccgaaaccaacugggccagucggccugggcuaaaccaacUGGGCUUUAGUCGGCUUGGGCCAggccgacugccuagugggGGCCCCGCGGGCUGAGCAGGCGaccuggccgaggcugacugggacuaagcggcuugggucagg
(((((((.((.((...(((.(((((((((((.(((....((.(((((((...((((((((((...))))))))))))))))).))(((((...)))))...((((...))))))).)))))))))))..)))...)).)).)))))))

Structure

       g  a  aac   -g           g   -----------------------uaaa  a       UUU          G 
ccuggcc aa cc   ugg  ccagucggccu ggc                           cc acUGGGC   AGUCGGCUUG  
||||||| || ||   |||  ||||||||||| |||                           || |||||||   |||||||||| G
ggacugg uu gg   auc  ggucagucgga ccg                           gg ugauccg   ucagccggAC  
       g  c  cga   ag           g   guccaGCGGACGAGUCGGGCGCCCCGG  g       ---          C 

Annotation confidence Low

Genome context

1: 70862451-70862598 [-]

Mature bdi-miR7766-5p

• Accession: MIMAT0030280
• Description: Brachypodium distachyon bdi-miR7766-5p mature miRNA
• Sequence: 45 - UGGGCUUUAGUCGGCUUGGGCCA - 67
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7766-3p

• Accession: MIMAT0030281
• Description: Brachypodium distachyon bdi-miR7766-3p mature miRNA
• Sequence: 86 - GGCCCCGCGGGCUGAGCAGGCG - 107
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443