Stem-loop bdi-MIR7768b

Accession

MI0025390

Description

Brachypodium distachyon bdi-MIR7768b precursor miRNA

Sequence

7079 reads, 102.0 reads per million, 21 experiments

cuccgcggcgcucccggUCGAGGACGGCCCCGCCGCAGcgcuccccuucgcgcuagaacuacgcacgcggcggcggcGGCGGCGGCGCCGUCCUCGACcgggagcgccgcggacg
.(((((((((((((((((((((((((((.((((((((((((........))))).......(((.(((....))))))))))))).)))))))))))))))))))))))))))..

Structure

-c                           C       ------------------------     ucc 
  uccgcggcgcucccggUCGAGGACGGC CCGCCGC                        AGcgc   c
  ||||||||||||||||||||||||||| |||||||                        |||||    
  aggcgccgcgagggcCAGCUCCUGCCG GGCGGCG                        ucgcg   c
gc                           C       Gcggcggcggcgcacgcaucaaga     cuu 

Annotation confidence Medium

Genome context

5: 21264994-21265108 [-]

Mature bdi-miR7768b-5p

• Accession: MIMAT0030286
• Description: Brachypodium distachyon bdi-miR7768b-5p mature miRNA
• Sequence: 18 - UCGAGGACGGCCCCGCCGCAG - 38
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7768b-3p

• Accession: MIMAT0030287
• Description: Brachypodium distachyon bdi-miR7768b-3p mature miRNA
• Sequence: 78 - GGCGGCGGCGCCGUCCUCGAC - 98
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443