Stem-loop bdi-MIR7775

Accession

MI0025397

Description

Brachypodium distachyon bdi-MIR7775 precursor miRNA

Sequence

4785 reads, 43.0 reads per million, 21 experiments

acaaAAUUAAACCGGUUUAUUCUGAAGCaccaguguuuauuucuauauuagaggugccuaauuaagcACCUGUCCUAUAGAACACAAGCACuagugcuuagacaaaacccgguuuauuuugugca
(((((((.((((((((((..(((((.((((.(((((((..(((((((..(.((((((........)))))).)..)))))))...))))))).)))))))))..))).))))))))))))))...

Structure

---       U       -   AU     A    c       -au       uu g      cua 
   acaaAAU AAACCGG UUU  UCUGA GCac aguguuu   uucuaua  a aggugc   a
   ||||||| ||||||| |||  ||||| |||| |||||||   |||||||  | ||||||    
   uguuuua uuuggcc aaa  agauu cgug uCACGAA   AAGAUAU  U UCCAcg   u
acg       -       c   ac     -    a       CAC       CC G      aau 

Annotation confidence Low

Genome context

3: 38334085-38334209 [+]

Mature bdi-miR7775-5p

• Accession: MIMAT0030300
• Description: Brachypodium distachyon bdi-miR7775-5p mature miRNA
• Sequence: 5 - AAUUAAACCGGUUUAUUCUGAAGC - 28
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7775-3p

• Accession: MIMAT0030301
• Description: Brachypodium distachyon bdi-miR7775-3p mature miRNA
• Sequence: 68 - ACCUGUCCUAUAGAACACAAGCAC - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443