Accession
MI0025401
Description
Brachypodium distachyon
bdi-MIR7779 precursor miRNA
Sequence
gggcagcgacGAGGUCAUUGUCAGACAUGGGAAGucccacgucagcccucggccagaucaucggagaccuccuuaaucuuggugcaauggucaaugauggagcccuugcacgaugcgaugaaguuugugcaacgucuccacgauggccuaggccauaggaauggucgccuuuugguccaugaucaugccgaagacggaggaggaaacuguggaguggauucacgaacaaaucgaugauccgccaauuguuguccuugaggucaaugugguuccugaugucauacUUCUCGAUCUGUAGACCGAUCUAGuagcgcuagug
.(((.((.((.(((((.((..((((..((((((((...(((((((.((.((((..((((((((....(((((((..((((.(.(((.(((((.....(((((.(.((((((((.((......)))))))))).).)))))..(((((....)))))....((((..(((....)))))))))))))))).))))..)))))))....((((((.....)))))).......)))))))).)))....((((.((....)).))))).))...)))))))...)))))))).))))..))..))))).)).)))))....
.(((.((.((.(((((.((..((((..((((((((...(((((((.((.((((..((((((((....(((((((..((((.(.(((.(((((.....(((((.(.((((((((.((......)))))))))).).)))))..(((((....)))))....((((..(((....)))))))))))))))).))))..)))))))....((((((.....)))))).......)))))))).)))....((((.((....)).))))).))...)))))))...)))))))).))))..))..))))).)).)))))....
Structure
---g a g G -A GU CA ccc --c u ---------------------- ca ------------------------gaga aa g u a -----------------------------------aauga c c u ga
ggc gc ac AGGUC UU CAGA UGGGAAGu acgucag cc c ggc gaucaucg ccuccuu ucuu g gca ugguc uggag c uugcacga gc u
||| || || ||||| || |||| |||||||| ||||||| || | ||| |||||||| ||||||| |||| | ||| ||||| ||||| | |||||||| ||
ucg cg uG UCUAG AG GUCU GCUCUUca uguaguc gg g ccg cuaguagc ggaggag agaa c cgu acuag accuc g aacguguu ug g
guga - a A CC AU -A uac cuu u uaacuggaguuccuguuguuaa -c uaaacaagcacuuaggugaggugucaaa gc g - - uaccugguuuuccgcugguaaggauaccggauccgguagc u c - aa
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
1: 38848227-38848545 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bdi-MIR7779
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bdi-miR7779-5p
| Accession | MIMAT0030312 |
| Description | Brachypodium distachyon bdi-miR7779-5p mature miRNA |
| Sequence | 11 - GAGGUCAUUGUCAGACAUGGGAAG - 34 |
| Evidence |
experimental
Illumina [1] |
Mature bdi-miR7779-3p
| Accession | MIMAT0030313 |
| Description | Brachypodium distachyon bdi-miR7779-3p mature miRNA |
| Sequence | 285 - UUCUCGAUCUGUAGACCGAUCUAG - 308 |
| Evidence |
experimental
Illumina [1] |
References
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