Stem-loop bdi-MIR7780

Accession

MI0025402

Description

Brachypodium distachyon bdi-MIR7780 precursor miRNA

Sequence

1341 reads, 60.0 reads per million, 13 experiments

ugggagccccaugaaugAGGGAGAAGAGGGAUAAUUUAguggccuuccuacuuuagugguuuaaguAGGGACCUUGCUGAAGACGUUUUUUuucuucuag
((((...)))).......((((((((((((((..((((((((..(((((((((.........)))))))))..))))))))...))))))))))))))..

Structure

ugggagccccaugaaugA              -AA        cc         uag 
                  GGGAGAAGAGGGAU   UUUAgugg  uuccuacuu   u
                  ||||||||||||||   ||||||||  |||||||||   g
                  ucuucuuUUUUUUG   AAGUCGUU  AGGGAugaa   g
----------------ga              CAG        CC         uuu 

Annotation confidence Not enough data

Genome context

1: 68651831-68651930 [-]

Mature bdi-miR7780-5p

• Accession: MIMAT0030314
• Description: Brachypodium distachyon bdi-miR7780-5p mature miRNA
• Sequence: 18 - AGGGAGAAGAGGGAUAAUUUA - 38
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7780-3p

• Accession: MIMAT0030315
• Description: Brachypodium distachyon bdi-miR7780-3p mature miRNA
• Sequence: 67 - AGGGACCUUGCUGAAGACGUUUUUU - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443