Stem-loop bdi-MIR7783

Accession

MI0025405

Description

Brachypodium distachyon bdi-MIR7783 precursor miRNA

Sequence

4124 reads, 73.0 reads per million, 21 experiments

ccaucgugaacugcuggucgcgucuacuuggUAUCCAAGCUUAUGAUAUCUGuuaugccugauuccguuggguuauguucuuugguggaguuaaaugucagcaauggccaaaugcuucccuccacuagaaggcggucauguacaacagagaucauaAGCUCUGAUACCAUGUGGAUGAGAUugacaauuc
.......(((.((.(((((.(((((((.(((((((..((((((((((.((((((.(((.(((..(((((........((((.(((.(((((.....((((....)))).....)))))...)))..)))))))))))).))).)))))).))))))))))..))))))).))))))).))))).)).)))

Structure

ccaucgu   c  c     g       u       CA          A      a   c   uu     ggguuaug    -u   --u     uaaau    g 
       gaa ug ugguc cgucuac uggUAUC  AGCUUAUGAU UCUGuu ugc uga  ccguu        uucu  ugg   ggagu     guca c
       ||| || ||||| ||||||| |||||||  |||||||||| |||||| ||| |||  |||||        ||||  |||   |||||     ||||  
       cuu ac guUAG GUAGGUG ACCAUAG  UCGAauacua agacaa aug acu  ggcgg        aaga  acc   cuucg     cggu a
-------   a  a     A       U       UC          g      c   u   --     --------    uc   ucc     uaaac    a 

Annotation confidence Low

Genome context

2: 14480283-14480472 [-]

Mature bdi-miR7783-5p

• Accession: MIMAT0030320
• Description: Brachypodium distachyon bdi-miR7783-5p mature miRNA
• Sequence: 32 - UAUCCAAGCUUAUGAUAUCUG - 52
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7783-3p

• Accession: MIMAT0030321
• Description: Brachypodium distachyon bdi-miR7783-3p mature miRNA
• Sequence: 157 - AGCUCUGAUACCAUGUGGAUGAGAU - 181
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443