Stem-loop hhi-mir-1788

Accession

MI0025430

Description

Hippoglossus hippoglossus hhi-mir-1788 precursor miRNA

Sequence

ggauauacagucuuguuuucgaGGCUUGUUUUAAGUUGCCUGCGacuuguacacggacucaggcagcuaaagcaagucugggacgccacagacacaccuaca
.........((((.((.(((.((((((((((((.((((((((.(.((.......)).).)))))))))))))))))))).))).))...)))).........

Structure

ggauauaca    --u  u   g            A        C a  ug 
         gucu   gu uuc aGGCUUGUUUUA GUUGCCUG G cu  u
         ||||   || ||| |||||||||||| |||||||| | ||  a
         caga   cg agg ucugaacgaaau cgacggac c gg  c
acauccaca    cac  c   g            -        u a  ca 

Annotation confidence Not enough data

Genome context

Unknown

Mature hhi-miR-1788

• Accession: MIMAT0030352
• Description: Hippoglossus hippoglossus hhi-miR-1788 mature miRNA
• Sequence: 23 - GGCUUGUUUUAAGUUGCCUGCG - 44
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 23626677
   Characterization of novel precursor miRNAs using next generation sequencing and prediction of miRNA targets in Atlantic halibut
   Bizuayehu TT, Fernandes JM, Johansen SD, Babiak I
   PLoS One (2013) 8:e61378