Stem-loop hhi-mir-187

Accession

MI0025434

Description

Hippoglossus hippoglossus hhi-mir-187 precursor miRNA

Sequence

gugaccucucuggccgggccaagggcugcaacacaggacauggguccugcucuccuccccgcUCGUGUCUUGUGUUGCAGCCaguggagcugccug
...........(((.(..(((..((((((((((((((((((((((...............))))))))))))))))))))))..)))..).)))..

Structure

gugaccucucu   c gg   ag                      ccugcu 
           ggc g  cca  ggcugcaacacaggacaugggu      c
           ||| |  |||  ||||||||||||||||||||||      u
           ccg c  ggu  CCGACGUUGUGUUCUGUGCUcg      c
---------gu   u ga   ga                      ccccuc 

Annotation confidence Not enough data

Genome context

Unknown

Mature hhi-miR-187

• Accession: MIMAT0030356
• Description: Hippoglossus hippoglossus hhi-miR-187 mature miRNA
• Sequence: 63 - UCGUGUCUUGUGUUGCAGCC - 82
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 23626677
   Characterization of novel precursor miRNAs using next generation sequencing and prediction of miRNA targets in Atlantic halibut
   Bizuayehu TT, Fernandes JM, Johansen SD, Babiak I
   PLoS One (2013) 8:e61378