Stem-loop hhi-mir-199a

Accession

MI0025436

Description

Hippoglossus hippoglossus hhi-mir-199a precursor miRNA

Literature search

1 open access papers mention hhi-mir-199a
(3 sentences)

Sequence

gcccgccugCCCAGUGUUCAGACUACCUGUUCaggaaguagugguuguacaguagucugcacauugguuaggcuggcuggggaagcacggg
(((.(((((.(((((((.((((((((.(((.(((..........))).))))))))))).))))))).))))).)))..............

Structure

--------------   c     C       U        C   U   gaag 
              gcc gccug CCAGUGU CAGACUAC UGU Cag    u
              ||| ||||| ||||||| |||||||| ||| |||     
              cgg cggau gguuaca gucugaug aca guu    a
gggcacgaaggggu   u     u       c        -   u   ggug 

Annotation confidence Low

Genome context

Unknown

Mature hhi-miR-199a

• Accession: MIMAT0030358
• Description: Hippoglossus hippoglossus hhi-miR-199a mature miRNA
• Sequence: 10 - CCCAGUGUUCAGACUACCUGUUC - 32
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 23626677
   Characterization of novel precursor miRNAs using next generation sequencing and prediction of miRNA targets in Atlantic halibut
   Bizuayehu TT, Fernandes JM, Johansen SD, Babiak I
   PLoS One (2013) 8:e61378