miRBase entry: hhi-mir-430a-3

Stem-loop hhi-mir-430a-3


Accession
MI0025442
Description
Hippoglossus hippoglossus hhi-mir-430a-3 precursor miRNA

Literature search
2 open access papers mention hhi-mir-430a-3
(8 sentences)

Sequence

acuagguggucaccagcuuuacccuaacacaagcaaagacuugccuucugaaagcagUAAGUGCUAUUUGUUGGGGUAGuguugcuga
.........(((.((((.(((((((((((..((((...(((.((.........)))))...))))...))))))))))).)))).)))

Structure
acuaggugg   c    u           -ca    aag   u  cuu 
         uca cagc uuacccuaaca   agca   acu gc   c
         ||| |||| |||||||||||   ||||   ||| ||   u
         agu guug GAUGGGGUUGU   UCGU   Uga cg   g
---------   c    u           UUA    GAA   -  aaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature hhi-miR-430a

Accession MIMAT0030341
Description Hippoglossus hippoglossus hhi-miR-430a mature miRNA
Sequence 58 - UAAGUGCUAUUUGUUGGGGUAG - 79
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 23626677
    Characterization of novel precursor miRNAs using next generation sequencing and prediction of miRNA targets in Atlantic halibut
    Bizuayehu TT, Fernandes JM, Johansen SD, Babiak I
    PLoS One (2013) 8:e61378