miRBase entry: hhi-mir-15a

Stem-loop hhi-mir-15a


Accession
MI0025448
Description
Hippoglossus hippoglossus hhi-mir-15a precursor miRNA


Sequence

cuggugaugcugUAGCAGCACGGAAUGGUUUGUGaguuacacugagauacaagccaugcugugcugccgca
..........(((.(((((((((.((((((((((..(((...)))..)))))))))).))))))))).)))

Structure
cuggugaugc   A         A          ag   c 
          ugU GCAGCACGG AUGGUUUGUG  uua  
          ||| ||||||||| ||||||||||  ||| a
          acg cgucguguc uaccgaacau  agu  
----------   c         g          ag   c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature hhi-miR-15a

Accession MIMAT0030366
Description Hippoglossus hippoglossus hhi-miR-15a mature miRNA
Sequence 13 - UAGCAGCACGGAAUGGUUUGUG - 34
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 23626677
    Characterization of novel precursor miRNAs using next generation sequencing and prediction of miRNA targets in Atlantic halibut
    Bizuayehu TT, Fernandes JM, Johansen SD, Babiak I
    PLoS One (2013) 8:e61378