Stem-loop rgl-MIR7798

Accession

MI0025451

Description

Rehmannia glutinosa rgl-MIR7798 precursor miRNA

Sequence

uaAGGGAGUGUUUGCAAAAACUuaugcuuucagaugaagugauuaucguagcagaugcgaaaaguuguugagaaucagaaaaccuaaagcacaucuccccugcuuuuagguucuacuuaaauuauauaaauuagaagcaaaaauuggcauuugaaaacacuauaaacuucuuuuuuucagccaaaagcugauaaucacuuucuucgaauauuugcaaacacucccuuag
((((((((((((((((((..........(((.((.((((((((((((...((....))....((((((((((((..(((((((((((((((.........))).))))))))..................(((((.((........)).))))).............))))..))))))))....)))))))))))))))).)).)))..)))))))))))))))))).

Structure

-                  AACUuaugcu   a  u            guagcagaugcgaaa    ----        uc    -------------------------------------------------------        -   cau 
 uaAGGGAGUGUUUGCAAA          uuc ga gaagugauuauc               aguu    guugagaa  agaa                                                       aaccuaaa gca   c
 ||||||||||||||||||          ||| || ||||||||||||               ||||    ||||||||  ||||                                                       |||||||| |||   u
 auucccucacaaacguuu          aag uu uuucacuaauag               ucga    cgacuuuu  ucuu                                                       uuggauuu cgu   c
g                  --------au   c  c            ---------------    aaac        uu    caaauaucacaaaaguuuacgguuaaaaacgaagauuaaauauauuaaauucauc        u   ccc 

Annotation confidence Not enough data

Genome context

Unknown

Mature rgl-miR7798

• Accession: MIMAT0032239
• Description: Rehmannia glutinosa rgl-miR7798 mature miRNA
• Sequence: 3 - AGGGAGUGUUUGCAAAAACU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23861915
   Transcriptome/degradome-wide identification of R. glutinosa miRNAs and their targets: the role of miRNA activity in the replanting disease
   Li MJ, Yang YH, Chen XJ, Wang FQ, Lin WX, Yi YJ, Zeng L, Yang SY, Zhang ZY
   PLoS One (2013) 8:e68531