Stem-loop rgl-MIR7804

Accession

MI0025457

Description

Rehmannia glutinosa rgl-MIR7804 precursor miRNA

Sequence

aaagccaacuAGGGGUGUUCAUCGAAUCGAAUUccgaauuuuucgacuuccucgaaucgaaUUUAAUCGAAUGAACAUUUUAAAcuucaauucgaaauucgauccuaauucgauuaauucgaaucgaauuuaaacggauugaauuucucgauuuccgaau
...........((((((((((((((...((((((.((....(((((.....)))))))))))))..))).)))))))))))............((((((((((((.(((((((((......))))))))).....))))))))))))(((.....)))..

Structure

--------------------------------------------------------------------aaagccaacuA           -   AUC      c  auuu     c 
                                                                               GGGGUGUUCAU CGA   GAAUUc ga    uucga u
                                                                               ||||||||||| |||   |||||| ||    ||||| u
                                                                               UUUUACAAGUA GCU   UUUaag cu    aagcu c
uaagccuuuagcucuuuaaguuaggcaaauuuaagcuaagcuuaauuagcuuaauccuagcuuaaagcuuaacuucAAA           A   -AA      -  ----     c 

Annotation confidence Not enough data

Genome context

Unknown

Mature rgl-miR7804-5p

• Accession: MIMAT0032245
• Description: Rehmannia glutinosa rgl-miR7804-5p mature miRNA
• Sequence: 11 - AGGGGUGUUCAUCGAAUCGAAUU - 33
• Evidence: experimental ; Illumina [1]

Mature rgl-miR7804-3p

• Accession: MIMAT0032246
• Description: Rehmannia glutinosa rgl-miR7804-3p mature miRNA
• Sequence: 62 - UUUAAUCGAAUGAACAUUUUAAA - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23861915
   Transcriptome/degradome-wide identification of R. glutinosa miRNAs and their targets: the role of miRNA activity in the replanting disease
   Li MJ, Yang YH, Chen XJ, Wang FQ, Lin WX, Yi YJ, Zeng L, Yang SY, Zhang ZY
   PLoS One (2013) 8:e68531