Stem-loop rno-mir-155

Accession

MI0025509

Description

Rattus norvegicus rno-mir-155 precursor miRNA

Literature search

661 open access papers mention rno-mir-155
(3238 sentences)

Sequence

19152 reads, 22.0 reads per million, 487 experiments

cugUUAAUGCUAAUUGUGAUAGGGGUUUuggccucugacugaCUCCUACCUGUUAGCAUUAACAg
((((((((((((((.(.(.((((((((..(........).)))))))))).))))))))))))))

Structure

              U U A        Uu gcc 
cugUUAAUGCUAAU G G UAGGGGUU  g   u
|||||||||||||| | | ||||||||  |    
gACAAUUACGAUUG C C AUCCUCag  c   c
              U - -        -u agu 

Annotation confidence High

Genome context

chr11: 24176603-24176667 [+]

Mature rno-miR-155-5p

• Accession: MIMAT0030409
• Description: Rattus norvegicus rno-miR-155-5p mature miRNA
• Sequence: 4 - UUAAUGCUAAUUGUGAUAGGGGUUU - 28
• Evidence: not_experimental

Mature rno-miR-155-3p

• Accession: MIMAT0030410
• Description: Rattus norvegicus rno-miR-155-3p mature miRNA
• Sequence: 43 - CUCCUACCUGUUAGCAUUAACA - 64
• Evidence: not_experimental

References

1. PubMed ID: 23329697
   Rat mir-155 generated from the lncRNA Bic is 'hidden' in the alternate genomic assembly and reveals the existence of novel mammalian miRNAs and clusters
   "Uva P, Da Sacco L, Del Corno M, Baldassarre A, Sestili P, Orsini M, Palma A, Gessani S, Masotti A"
   "RNA (2013) 19:365-379