Stem-loop bta-mir-7858

Accession

MI0025528

Description

Bos taurus bta-mir-7858 precursor miRNA

Sequence

30056 reads, 21.0 reads per million, 291 experiments

UAGGAUUUGGAAAGAUUGCUUUgaauuuguagaucaACGCAAUUCUUCAAAAUCUUAGC
((((((((.(((.((((((.((((.........)))).)))))).))).))))))))..

Structure

--        G   A      U    auu 
  UAGGAUUU GAA GAUUGC UUga   u
  |||||||| ||| |||||| ||||   g
  AUUCUAAA CUU UUAACG Aacu   u
CG        A   C      C    aga 

Annotation confidence High

Genome context

20: 10263064-10263122 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-7858

Mature bta-miR-7858-5p

• Accession: MIMAT0051047
• Description: Bos taurus bta-miR-7858-5p mature miRNA
• Sequence: 1 - UAGGAUUUGGAAAGAUUGCUUU - 22
• Evidence: experimental ; Illumina [1]

Mature bta-miR-7858-3p

• Accession: MIMAT0030433
• Description: Bos taurus bta-miR-7858-3p mature miRNA
• Sequence: 37 - ACGCAAUUCUUCAAAAUCUUAGC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23472090
   Next generation sequencing reveals the expression of a unique miRNA profile in response to a gram-positive bacterial infection
   Lawless N, Foroushani AB, McCabe MS, O'Farrelly C, Lynn DJ
   PLoS One (2013) 8:e57543