Stem-loop bta-mir-7860

Accession

MI0025534

Description

Bos taurus bta-mir-7860 precursor miRNA

Sequence

22649 reads, 12.0 reads per million, 221 experiments

CACUCUGUGCAGCCGCUCCAgggaggcagcaguuguggugacUGGAGCGGCUGCACAGAGCGU
..(((((((((((((((((((....((.((....)).))..)))))))))))))))))))...

Structure

-CA                   ggag  a  a 
   CUCUGUGCAGCCGCUCCAg    gc gc g
   |||||||||||||||||||    || ||  
   GAGACACGUCGGCGAGGUc    ug ug u
UGC                   --ag  g  u 

Annotation confidence High

Genome context

12: 15589232-15589294 [+]

Mature bta-miR-7860-5p

• Accession: MIMAT0051052
• Description: Bos taurus bta-miR-7860-5p mature miRNA
• Sequence: 1 - CACUCUGUGCAGCCGCUCCA - 20
• Evidence: experimental ; Illumina [1]

Mature bta-miR-7860-3p

• Accession: MIMAT0030439
• Description: Bos taurus bta-miR-7860-3p mature miRNA
• Sequence: 43 - UGGAGCGGCUGCACAGAGCGU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23472090
   Next generation sequencing reveals the expression of a unique miRNA profile in response to a gram-positive bacterial infection
   Lawless N, Foroushani AB, McCabe MS, O'Farrelly C, Lynn DJ
   PLoS One (2013) 8:e57543