Stem-loop bta-mir-7862

Accession

MI0025537

Description

Bos taurus bta-mir-7862 precursor miRNA

Literature search

1 open access papers mention bta-mir-7862
(2 sentences)

Sequence

9225 reads, 4.0 reads per million, 245 experiments

CACAGCUCCAGGGGACGCCGUUccuguccuggacuaugugagUGGUGCUCCCUGGAGCUGAGC
..((((((((((((.(((((((((.(((...)))...).)))))))).))))))))))))...

Structure

-CA            A        - --u   c 
   CAGCUCCAGGGG CGCCGUUc c   guc  
   |||||||||||| |||||||| |   ||| u
   GUCGAGGUCCCU GUGGUgag g   cag  
CGA            C        u uau   g 

Annotation confidence High

Genome context

9: 60574891-60574953 [-]

Mature bta-miR-7862-5p

• Accession: MIMAT0051055
• Description: Bos taurus bta-miR-7862-5p mature miRNA
• Sequence: 1 - CACAGCUCCAGGGGACGCCGUU - 22
• Evidence: experimental ; Illumina [1]

Mature bta-miR-7862-3p

• Accession: MIMAT0030442
• Description: Bos taurus bta-miR-7862-3p mature miRNA
• Sequence: 43 - UGGUGCUCCCUGGAGCUGAGC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23472090
   Next generation sequencing reveals the expression of a unique miRNA profile in response to a gram-positive bacterial infection
   Lawless N, Foroushani AB, McCabe MS, O'Farrelly C, Lynn DJ
   PLoS One (2013) 8:e57543