Stem-loop bta-mir-6516

Accession

MI0025538

Description

Bos taurus bta-mir-6516 precursor miRNA

Literature search

1 open access papers mention bta-mir-6516
(2 sentences)

Sequence

38 reads, 22 reads per million, 21 experiments

UUUGCAGUAACAGGUGUGAACauucuagcagcaguuugaugaucauguaugauacugcaaac
(((((((((.((..(((((.((((..(((....))).)))).)))))..)).))))))))).

Structure

-         A  GG     A    cu   a 
 UUUGCAGUA CA  UGUGA Cauu  agc g
 ||||||||| ||  ||||| ||||  |||  
 aaacgucau gu  guacu guag  uug c
c         a  au     a    -u   a 

Annotation confidence Not enough data

Genome context

chr19: 55638811-55638872 [+]

Mature bta-miR-6516

• Accession: MIMAT0030443
• Description: Bos taurus bta-miR-6516 mature miRNA
• Sequence: 1 - UUUGCAGUAACAGGUGUGAAC - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23472090
   Next generation sequencing reveals the expression of a unique miRNA profile in response to a gram-positive bacterial infection
   Lawless N, Foroushani AB, McCabe MS, O'Farrelly C, Lynn DJ
   PLoS One (2013) 8:e57543