miRBase entry: bta-mir-2284ac

Stem-loop bta-mir-2284ac


Accession
MI0025542
Description
Bos taurus bta-mir-2284ac precursor miRNA

Literature search
13 open access papers mention bta-mir-2284ac
(33 sentences)

Sequence

13557 reads, 7.0 reads per million, 286 experiments
AAAUGUUCGCUUGGCUUUUUCCauacuaccuuacagAAAAACCUGAGUGAACUUUUC
....((((((((((.((((((..((......))..)))))).)))))))))).....

Structure
-AAAU          C      Ca  cu 
     GUUCGCUUGG UUUUUC  ua  a
     |||||||||| ||||||  ||   
     CAAGUGAGUC AAAAAg  au  c
CUUUU          C      ac  uc 


Annotation confidence High
Do you think this miRNA is real?

Genome context
27: 19451218-19451274 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-2284ac
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-2284ac-5p

Accession MIMAT0030447
Description Bos taurus bta-miR-2284ac-5p mature miRNA
Sequence 1 - AAAUGUUCGCUUGGCUUUUUCC - 22
Evidence experimental
Illumina [1]

Mature bta-miR-2284ac-3p

Accession MIMAT0051058
Description Bos taurus bta-miR-2284ac-3p mature miRNA
Sequence 37 - AAAAACCUGAGUGAACUUUUC - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23472090
    Next generation sequencing reveals the expression of a unique miRNA profile in response to a gram-positive bacterial infection
    Lawless N, Foroushani AB, McCabe MS, O'Farrelly C, Lynn DJ
    PLoS One (2013) 8:e57543