Stem-loop bta-mir-7865

Accession

MI0025545

Description

Bos taurus bta-mir-7865 precursor miRNA

Sequence

6436 reads, 5.0 reads per million, 303 experiments

CAGGGAGGGCAGGGGAGGGaggcugugugcaggccugccCUGACUGCCGCCCCCCGCAGg
..(((..(((((...(((((((((.......))))).))))..)))))..))).......

Structure

-----CA   AG     GGG    -     gu 
       GGG  GGCAG   AGGG aggcu  g
       |||  |||||   |||| |||||  u
       CCC  CCGUC   UCcc uccgg  g
gGACGCC   CG     -AG    g     ac 

Annotation confidence Medium

Genome context

18: 62222901-62222960 [+]

Mature bta-miR-7865-5p

• Accession: MIMAT0030450
• Description: Bos taurus bta-miR-7865-5p mature miRNA
• Sequence: 1 - CAGGGAGGGCAGGGGAGGG - 19
• Evidence: experimental ; Illumina [1]

Mature bta-miR-7865-3p

• Accession: MIMAT0051061
• Description: Bos taurus bta-miR-7865-3p mature miRNA
• Sequence: 40 - CUGACUGCCGCCCCCCGCAG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23472090
   Next generation sequencing reveals the expression of a unique miRNA profile in response to a gram-positive bacterial infection
   Lawless N, Foroushani AB, McCabe MS, O'Farrelly C, Lynn DJ
   PLoS One (2013) 8:e57543